Every situation is different. The plan should probably have written administrative procedures outlining what actions to take, or not take. The goal is usually to treat all impacted participants alike, although you might have a
de minimus exception. Usually it makes sense to seek reimbursement, but the plan sponsor will often face a decision when that does not produce anything.
This revenue ruling deals shows how the IRS expects to deal with any repayment, at least from a tax perspective.
http://benefitslink.com/IRS/revrul2002-84.shtml